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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs72833415 chr2:113063257 G/A RGPD5 chr2:110550335-110615272:+ -0.47 -6.86 2.21E-11 Box Plot
THCA rs72833428 chr2:113085785 T/C RGPD5 chr2:110550335-110615272:+ -0.47 -6.88 1.86E-11 Box Plot
THCA rs72833431 chr2:113101104 A/G RGPD5 chr2:110550335-110615272:+ -0.47 -7 8.61E-12 Box Plot
THCA rs72833432 chr2:113102746 T/C RGPD5 chr2:110550335-110615272:+ -0.48 -6.82 2.71E-11 Box Plot
THCA rs72836482 chr6:26359241 A/T RNF5P1 chr8:38458179-38458718:- 0.58 6.28 7.82E-10 Box Plot
THCA rs72839445 chr6:27249686 G/A RNF5P1 chr8:38458179-38458718:- 0.74 6.36 4.66E-10 Box Plot
THCA rs72839445 chr6:27249686 G/A ZFP57 chr6:29640169-29648887:- 0.92 8.5 2.44E-16 Box Plot
THCA rs72839477 chr6:27327000 C/T RNF5P1 chr8:38458179-38458718:- 0.72 6.12 1.96E-9 Box Plot
THCA rs72839477 chr6:27327000 C/T ZFP57 chr6:29640169-29648887:- 0.83 7.55 2.27E-13 Box Plot
THCA rs72840907 chr17:7213560 C/G EIF5AL1 chr10:81272357-81276196:+ 0.33 7.16 2.98E-12 Box Plot
THCA rs72841509 chr6:26368279 G/A RNF5P1 chr8:38458179-38458718:- 0.58 6.29 7.27E-10 Box Plot
THCA rs72841536 chr6:26378288 T/A RNF5P1 chr8:38458179-38458718:- 0.6 6.36 4.72E-10 Box Plot
THCA rs72841536 chr6:26378288 T/A ZFP57 chr6:29640169-29648887:- 0.55 6.05 2.88E-9 Box Plot
THCA rs72843784 chr6:26498758 G/T ZFP57 chr6:29640169-29648887:- 0.93 7.82 3.48E-14 Box Plot
THCA rs72844462 chr6:26563864 A/C ZFP57 chr6:29640169-29648887:- 0.79 7.83 3.08E-14 Box Plot